T. pseudonana has since become a key model organism for studying diatom physiology. T number: T01078: Org code: tps: Aliases: THAPS, 296543: Full name: Thalassiosira pseudonana: Definition: Thalassiosira pseudonana CCMP1335: Category: Reference genome Marine diatoms are important primary producers that thrive in diverse and dynamic environments. ADS CAS PubMed Google Scholar Biosynthesis of unsaturated fatty acids - Thalassiosira pseudonana [ Pathway menu | Organism menu | Pathway entry | Download KGML | User data mapping] Pathway menu | Organism menu | Pathway entry | Download KGML | User data mapping] PLEASE NOTE: The Thalassiosira pseudonana genome sequence is composed of "finished chromosomes" (Thaps3) and "unmapped sequence" (Thaps3_bd), which were annotated separately.Please use both portals to make a complete analysis of the genome. These include genome sequences for a few free-living marine protists such as the red algae Cyanidioschyzon merolae, the diatom Thalassiosira pseudonana, the prasinophytes O. tauri and Ostreococcus lucimarinus, the green algae Chlamydomonas reinhardtii, and the ciliates Paramecium tetraurelia and Tetrahymena thermophila.
Status v3.0 finished chromsomes and unmapped sequence (May 2007): This Thalassiosira pseudonana genome … We report the 34 million-base pair draft nuclear genome of the marine diatom Thalassiosira pseudonana and its 129 thousand-base pair plastid and 44 thousand-base pair mitochondrial genomes.
PLEASE NOTE: The Thalassiosira pseudonana genome sequence is composed of "finished chromosomes" (Thaps3) and "unmapped sequence"(Thaps3_bd), which were annotated separately.Please use both portals to make a complete analysis of the genome. Probes were tiled across both strands of the ≈34-megabase Thalassiosira pseudonana genome , and the resulting arrays were hybridized with RNA extracted from cells grown either in nutrient complete media or in growth-limiting concentrations of silicon (the biologically available form of silicon is silicic acid) [supporting information (SI) Fig. PLEASE NOTE: The Thalassiosira pseudonana genome sequence is composed of "finished chromosomes" (Thaps3) and "unmapped sequence"(Thaps3_bd), which were annotated separately. Science 306 , 79–86 (2004). The T. pseudonana genome was sequenced by using a whole-genome shotgun approach, with 14-fold sequence coverage (table S1). Data Release Policy As a public service, the raw sequence data from the Thalassiosira pseudonana genome sequencing project is …
Data Release Policy As a public service, the raw sequence data from the Thalassiosira pseudonana genome sequencing project is … About the Thalassiosira pseudonana genome.
Here we present a methodology to edit the genome of Thalassiosira pseudonana, a model centric diatom with both ecological significance and high biotechnological potential, using CRISPR-Cas. PLEASE NOTE: The Thalassiosira pseudonana genome sequence is composed of "finished chromosomes" (Thaps3) and "unmapped sequence" (Thaps3_bd), which were annotated separately. Thalassiosira pseudonanais a centric diatom that belongs to the diverse algal group, likely arose from a common secondary endosymbiotic event, involving at least five different genomes.Diatoms are involved in various biogeochemical cycles most notably involving carbon, nitrogen and silicon, and contribute 30% to 40% of marine primary productivity.
We combined genome‐wide and targeted comparative transcriptomic analysis with diagnostic biochemistry and in vivo cell staining as a platform to identify the suite of genes involved in acclimation to Fe and associated oxidative stress in Thalassiosira pseudonana .
Genomic DNA was isolated from a clonal culture produced by repeated mitotic divisions of a single diploid founder cell.